WormBase Tree Display for Gene: WBGene00060069

WBGene00060069 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 3
    Name: CGC_name: Cre-rpl-19 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29726
      Molecular_name: CRE29726
        CRE29726.1
        RP02401
      Other_name: cr01.sctg16.wum.238
      Public_name: Cre-rpl-19
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:41 WBPerson2970 Name_change: CGC_name: Cre-rpl-19
        3 03 Jul 2008 11:45:30 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29726
                Other_name: cr01.sctg16.wum.238
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    RNASeq_FPKM: WBls:0000004 217.445 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        217.478 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        217.511 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 2441.14 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        3612.4 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        3883.56 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        3930.88 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        3978.2 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        4146.71 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 2085.11 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2464.94 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2629.55 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        2680.15 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 1794.06 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        1892.79 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        2038.14 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2212.85 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2213.33 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2388.53 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        2571.59 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2592 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 2149.51 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        2189.18 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155554
      00155555
      00155556
      00155557
      00155558
    Ortholog (28)
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of C. elegans rpl-19. In C. elegans, rpl-19 is involved in determination of adult lifespan. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29726
    Corresponding_transcript: CRE29726.1
    Other_sequence (384)
  Experimental_info: Expr_pattern: Expr1103562
    Microarray_results: GPL14146_CRE29726_342-401_0.927_10_B
      GPL14146_CRE29726_484-543_0.971_1_A
      GPL14146_CRE29726_533-592_0.970_2_C
    Expression_cluster: WBPaper00054996:activated_sperm_CRE
      WBPaper00054996:membranous_oraganelle_CRE
  Method: Gene