WormBase Tree Display for Gene: WBGene00060091

WBGene00060091 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 3
    Name: CGC_name: Cre-syx-17 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29495
      Molecular_name: CRE29495
        CRE29495.1
        RP12976
      Other_name: cr01.sctg16.wum.260
      Public_name: Cre-syx-17
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:30 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29495
                Other_name: cr01.sctg16.wum.260
        3 16 Apr 2010 14:36:35 WBPerson2970 Name_change: CGC_name: Cre-syx-17
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: syx
    RNASeq_FPKM: WBls:0000004 22.9442 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        25.0672 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        27.1903 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 10.5115 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        11.9126 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        13.0697 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.42824 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        15.628 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        20.0825 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 1.4462 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        14.5231 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        20.777 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        21.3462 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 21.0619 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        21.9681 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        23.6351 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        36.0368 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        36.9644 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        48.4384 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        53.029 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        53.6541 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 21.2041 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        22.9607 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155580
      00155581
    Ortholog (22)
    Paralog: WBGene00059954 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00086109 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00051691 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00052350 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00060825 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00061550 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065322 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00068820 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of C. elegans syx-17. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29495
    Corresponding_transcript: CRE29495.1
    Other_sequence (30)
  Experimental_info: Expr_pattern: Expr1094874
    Microarray_results: GPL14146_CRE29495_209-268_0.920_15_A
      GPL14146_CRE29495_330-389_0.912_19_C
      GPL14146_CRE29495_467-526_0.924_14_B
  Method: Gene