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WormBase Tree Display for Gene: WBGene00060102

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Name Class

WBGene00060102SMapS_parentSequenceCrem_Contig9
IdentityVersion3
NameCGC_nameCre-edc-3From_analysisInferred_from_orthology
Sequence_nameCRE29488
Molecular_nameCRE29488
CRE29488.1
RP05397
Other_namecr01.sctg16.wum.271
Public_nameCre-edc-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:30WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29488
Other_namecr01.sctg16.wum.271
304 Jul 2008 11:06:41WBPerson4055Name_changeCGC_nameCre-edc-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classedc
RNASeq_FPKMWBls:0000004117.357From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
120.553From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
123.749From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002712.5981From_analysisRNASeq.remanei.WBls:0000027.control_mean
13.6031From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
15.4546From_analysisRNASeq.remanei.WBls:0000027.control_median
17.3062From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
17.5575From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.92541From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003812.4697From_analysisRNASeq.remanei.WBls:0000038.control_mean
14.9234From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
17.9041From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
4.58163From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004120.6621From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
21.537From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
22.4678From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
43.4016From_analysisRNASeq.remanei.WBls:0000041.control_median
44.4529From_analysisRNASeq.remanei.WBls:0000041.control_mean
64.3354From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
67.7815From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
69.9337From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010119.7691From_analysisRNASeq.remanei.total_over_all_stages.control_median
31.2718From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (17)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Lsm14-like, N-terminal; FDF domain; and Scd6-like Sm domain. Is an ortholog of C. elegans edc-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29488
Corresponding_transcriptCRE29488.1
Other_sequenceCRC04027_1
CBC06897_1
Experimental_infoExpr_patternExpr1092254
Microarray_resultsGPL14146_CRE29488_1414-1473_0.922_4_C
GPL14146_CRE29488_1523-1582_0.901_14_B
GPL14146_CRE29488_1690-1749_0.972_1_A
MethodGene