WormBase Tree Display for Gene: WBGene00060890

WBGene00060890 SMap: S_parent: Sequence: Crem_Contig34
  Identity: Version: 3
    Name: CGC_name: Cre-aex-5 From_analysis: Inferred_from_orthology
      Sequence_name: CRE20689
      Molecular_name: CRE20689
        CRE20689.1
        RP48350
      Other_name: cr01.sctg20.wum.82
      Public_name: Cre-aex-5
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-aex-5
        3 03 Jul 2008 11:45:34 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE20689
                Other_name: cr01.sctg20.wum.82
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aex
    RNASeq_FPKM: WBls:0000004 0.105816 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.211631 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 10.9775 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        12.4091 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        2.09346 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        2.30323 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        6.64037 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        6.94582 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 18.1111 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        22.1848 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        23.597 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        8.55143 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 3.6797 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.87555 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        4.19428 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        5.75571 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        5.97409 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        7.31714 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        8.13075 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        8.64714 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 7.21829 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        8.54317 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00156246
      00156247
      00156248
    Ortholog (45)
    Paralog: WBGene00059068 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00064328 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00071303 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00054005 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans aex-5. In C. elegans, aex-5 is involved in several processes, including neuropeptide processing; positive regulation of synaptic assembly at neuromuscular junction; and positive regulation of transport. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE20689
    Corresponding_transcript: CRE20689.1
    Other_sequence: Oden_isotig22904
      Acan_isotig14016
      Tcir_isotig22927
      Oden_isotig14971
      TSC05878_1
      CJC17003_1
      TS05545
  Experimental_info: Expr_pattern: Expr1113441
    Microarray_results: GPL14146_CRE20689_1148-1207_0.863_31_A
  Method: Gene