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WormBase Tree Display for Gene: WBGene00060917

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Name Class

WBGene00060917SMapS_parentSequenceCrem_Contig34
IdentityVersion3
NameCGC_nameCre-vps-20From_analysisInferred_from_orthology
Sequence_nameCRE20699
Molecular_nameCRE20699
CRE20699.1
RP33422
Other_namecr01.sctg20.wum.109
Public_nameCre-vps-20
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:35WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE20699
Other_namecr01.sctg20.wum.109
324 Nov 2008 09:32:48WBPerson2970Name_changeCGC_nameCre-vps-20
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvps
RNASeq_FPKMWBls:000000412.3646From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
13.6648From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
14.9649From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002714.0181From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
16.8449From_analysisRNASeq.remanei.WBls:0000027.control_median
18.9008From_analysisRNASeq.remanei.WBls:0000027.control_mean
19.6716From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
36.8059From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.10745From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003824.0759From_analysisRNASeq.remanei.WBls:0000038.control_mean
2.58585From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
32.7793From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
36.8626From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004137.3864From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
39.7373From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
43.9156From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
44.5283From_analysisRNASeq.remanei.WBls:0000041.control_median
45.1409From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
47.985From_analysisRNASeq.remanei.WBls:0000041.control_mean
60.1819From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
61.548From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010118.8854From_analysisRNASeq.remanei.total_over_all_stages.control_median
24.8099From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00156276
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to be involved in vacuolar transport. Is an ortholog of C. elegans vps-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE20699
Corresponding_transcriptCRE20699.1
Other_sequence (41)
Experimental_infoExpr_patternExpr1096806
Microarray_resultsGPL14146_CRE20699_333-392_0.865_26_A
GPL14146_CRE20699_484-543_0.920_4_B
GPL14146_CRE20699_578-637_0.900_15_C
MethodGene