WormBase Tree Display for Gene: WBGene00061387

WBGene00061387 SMap: S_parent: Sequence: Crem_Contig177
  Identity: Version: 3
    Name: CGC_name: Cre-gtf-2E1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE12281
      Molecular_name: CRE12281
        CRE12281.1
        RP00922
      Other_name: cr01.sctg23.wum.93
      Public_name: Cre-gtf-2E1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:37 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE12281
                Other_name: cr01.sctg23.wum.93
        3 08 Feb 2019 15:42:26 WBPerson1983 Name_change: CGC_name: Cre-gtf-2E1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gtf
    RNASeq_FPKM: WBls:0000004 16.6523 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        16.7373 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        16.8223 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.805005 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.92288 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        2.92722 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        3.86041 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        3.93155 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        8.78219 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.46692 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        0.892603 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        1.13245 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.03783 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 10.0275 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        10.5883 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        20.1499 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        20.2719 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        29.7114 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        30.1294 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        31.4417 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        9.73299 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 7.33368 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        9.88048 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00156747
    Ortholog (26)
    Structured_description: Automated_description: Predicted to be involved in transcription initiation at RNA polymerase II promoter. Is an ortholog of C. elegans gtf-2E1. In C. elegans, gtf-2E1 is involved in transcription initiation at RNA polymerase II promoter. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE12281
    Corresponding_transcript: CRE12281.1
    Other_sequence: Oden_isotig21245
      DI00545
      Tcol_isotig20329
      JI171116.1
      CBC00710_1
      JI216800.1
      Dviv_isotig23189
  Experimental_info: Expr_pattern: Expr1103033
    Microarray_results: GPL14146_CRE12281_1216-1275_0.954_2_B
      GPL14146_CRE12281_1234-1293_0.967_1_A
      GPL14146_CRE12281_972-1031_0.945_3_C
  Method: Gene