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WormBase Tree Display for Gene: WBGene00061475

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Name Class

WBGene00061475SMapS_parentSequenceCrem_Contig108
IdentityVersion4
NameSequence_nameCRE20483
Molecular_nameCRE20483
CRE20483.1
RP07482
Other_namecr01.sctg24.wum.81
Public_nameCRE20483
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:38WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE20483
Other_namecr01.sctg24.wum.81
301 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameCre-msp-56.2
404 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000040From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
RNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (35)
WBls:00000270.199143From_analysisRNASeq.remanei.WBls:0000027.control_median
0.398285From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
19.4618From_analysisRNASeq.remanei.WBls:0000027.control_mean
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
77.4487From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038109.114From_analysisRNASeq.remanei.WBls:0000038.control_mean
207.458From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
58.7473From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
61.1365From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
WBls:00000410.19653From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.858448From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1097.11From_analysisRNASeq.remanei.WBls:0000041.control_mean
1885.95From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.96833From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2121.09From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
2572.59From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
943.959From_analysisRNASeq.remanei.WBls:0000041.control_median
WBls:0000063 (12)
WBls:000010117.921From_analysisRNASeq.remanei.total_over_all_stages.control_median
412.808From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (85)
Paralog (53)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. Is an ortholog of C. elegans msp-36 and msp-56.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE20483
Corresponding_transcriptCRE20483.1
Other_sequence (53)
Experimental_infoExpression_clusterWBPaper00054996:activated_sperm_CRE
WBPaper00054996:membranous_oraganelle_CRE
WBPaper00054996:unactivated_spermatid_CRE
Remark[200204 pad] The CGC name Cre-msp-56.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene