WormBase Tree Display for Gene: WBGene00061652

WBGene00061652 SMap: S_parent: Sequence: Crem_Contig28
  Identity: Version: 3
    Name: CGC_name: Cre-nca-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE20293
      Molecular_name: CRE20293
        CRE20293.1
        RP42724
      Other_name: cr01.sctg26.wum.26
      Public_name: Cre-nca-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-nca-2
        3 03 Jul 2008 11:45:38 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE20293
                Other_name: cr01.sctg26.wum.26
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nca
    RNASeq_FPKM: WBls:0000004 0.169864 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        0.273917 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.377971 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.057664 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        0.470068 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        1.28439 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.35213 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        2.09872 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        2.78207 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.291947 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.059 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.43415 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        3.45089 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.212539 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.234968 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.248125 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.423456 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.468401 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.598786 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.67691 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.839076 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (11)
      WBls:0000101 0.508621 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        0.853773 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00157000
      00157001
      00157002
      00157003
      00157004
    Ortholog (33)
    Paralog: WBGene00066082 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051243 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00058196 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00068721 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00073165 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00074138 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00074869 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00079084 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00080174 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00084742 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable monoatomic cation channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans nca-2. In C. elegans, nca-2 is involved in positive regulation of GABAergic synaptic transmission; positive regulation of cholinergic synaptic transmission; and positive regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE20293
    Corresponding_transcript: CRE20293.1
    Other_sequence (33)
  Experimental_info: Expr_pattern: Expr1109307
    Microarray_results: GPL14146_CRE20293_4422-4481_0.814_79_B
      GPL14146_CRE20293_4426-4485_0.878_19_A
      GPL14146_CRE20293_5341-5400_0.965_1_C
  Method: Gene