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WormBase Tree Display for Gene: WBGene00063046

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Name Class

WBGene00063046SMapS_parentSequenceCrem_Contig40
IdentityVersion3
NameCGC_nameCre-xpb-1From_analysisInferred_from_orthology
Sequence_nameCRE01011
Molecular_nameCRE01011
CRE01011.1
RP31341
Other_namecr01.sctg35.wum.90
Public_nameCre-xpb-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:49WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE01011
Other_namecr01.sctg35.wum.90
321 Jul 2014 15:54:07WBPerson2970Name_changeCGC_nameCre-xpb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classxpb
RNASeq_FPKMWBls:000000438.5694From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
39.9671From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
41.3648From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002723.1599From_analysisRNASeq.remanei.WBls:0000027.control_mean
28.1642From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
28.6222From_analysisRNASeq.remanei.WBls:0000027.control_median
29.0803From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
3.07213From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
32.3231From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003819.4543From_analysisRNASeq.remanei.WBls:0000038.control_mean
25.9789From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
26.4391From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
5.94504From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004132.8305From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
33.0705From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
35.7142From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
61.6533From_analysisRNASeq.remanei.WBls:0000041.control_mean
61.8807From_analysisRNASeq.remanei.WBls:0000041.control_median
88.0473From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
89.3955From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
90.862From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010125.7052From_analysisRNASeq.remanei.total_over_all_stages.control_median
30.3734From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00158521
00158522
00158523
00158524
00158525
00158526
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to enable several functions, including ATP binding activity; DNA binding activity; and DNA helicase activity. Predicted to be involved in nucleotide-excision repair and transcription initiation at RNA polymerase II promoter. Is an ortholog of C. elegans xpb-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE01011
Corresponding_transcriptCRE01011.1
Other_sequence (93)
Experimental_infoExpr_patternExpr1101026
Microarray_resultsGPL14146_CRE01011_2034-2093_0.926_11_B
GPL14146_CRE01011_2107-2166_0.905_22_A
GPL14146_CRE01011_2187-2246_0.961_1_C
MethodGene