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WormBase Tree Display for Gene: WBGene00064254

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Name Class

WBGene00064254SMapS_parentSequenceCrem_Contig9
IdentityVersion3
NameCGC_nameCre-cdc-5LFrom_analysisInferred_from_orthology
Sequence_nameCRE29473
Molecular_nameCRE29473
CRE29473.1
RP20723
Other_namecr01.sctg47.wum.20
Public_nameCre-cdc-5L
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:56WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29473
Other_namecr01.sctg47.wum.20
303 Jul 2015 12:56:17WBPerson2970Name_changeCGC_nameCre-cdc-5L
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdc
RNASeq_FPKMWBls:0000004131.035From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
137.77From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
144.504From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002733.1502From_analysisRNASeq.remanei.WBls:0000027.control_mean
36.1602From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
39.0807From_analysisRNASeq.remanei.WBls:0000027.control_median
42.0011From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
48.5099From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5.92941From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003822.9087From_analysisRNASeq.remanei.WBls:0000038.control_mean
28.9098From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
30.8465From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
8.96982From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004128.8404From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
31.7645From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
33.4305From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
52.5313From_analysisRNASeq.remanei.WBls:0000041.control_median
56.4632From_analysisRNASeq.remanei.WBls:0000041.control_mean
71.6322From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
81.2555From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
91.8559From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:000010131.3055From_analysisRNASeq.remanei.total_over_all_stages.control_median
43.5447From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (31)
ParalogWBGene00059969Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SANT/Myb domain; Myb-like DNA-binding domain; Pre-mRNA splicing factor component Cdc5p/Cef1, C-terminal; pre-mRNA splicing factor component; and Homeobox-like domain superfamily. Is an ortholog of C. elegans cdc-5L.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29473
Corresponding_transcriptCRE29473.1
Other_sequence (64)
Experimental_infoExpr_patternExpr1097706
Microarray_resultsGPL14146_CRE29473_1091-1150_0.855_92_A
GPL14146_CRE29473_1164-1223_0.788_180_B
GPL14146_CRE29473_1301-1360_0.885_67_C
MethodGene