WormBase Tree Display for Gene: WBGene00064330

WBGene00064330 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 3
    Name: CGC_name: Cre-mat-3 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29638
      Molecular_name: CRE29638
        CRE29638.1
        RP40482
      Other_name: cr01.sctg47.wum.95
      Public_name: Cre-mat-3
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:58 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29638
                Other_name: cr01.sctg47.wum.95
        3 20 Mar 2018 10:26:10 WBPerson4025 Name_change: CGC_name: Cre-mat-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mat
    RNASeq_FPKM: WBls:0000004 2.52701 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        2.69627 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.86553 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.767011 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.39221 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        1.6726 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        1.7624 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        2.13259 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        2.39858 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.862955 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.48469 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        4.55643 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        5.03468 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 28.9366 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        29.2346 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        49.1601 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        49.2928 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        51.2121 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        8.34512 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        8.68437 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        8.713 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 10.6622 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        6.17882 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog (31)
    Paralog: WBGene00064908 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053802 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00069396 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00073040 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Tetratricopeptide-like helical domain superfamily and Tetratricopeptide repeat. Is an ortholog of C. elegans mat-3. In C. elegans, mat-3 is involved in asymmetric cell division; polarity specification of anterior/posterior axis; and positive regulation of metaphase/anaphase transition of meiosis I. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29638
    Corresponding_transcript: CRE29638.1
    Other_sequence: CBC09628_1
      JI169164.1
      Acan_isotig09315
      EX566140.1
      MC00400
      MCC03208_1
      GO249257.1
      Oden_isotig20970
  Experimental_info: Expr_pattern: Expr1097422
    Microarray_results: GPL14146_CRE29638_1339-1398_0.901_17_C
      GPL14146_CRE29638_1468-1527_0.895_22_B
      GPL14146_CRE29638_1589-1648_0.936_6_A
  Method: Gene