WormBase Tree Display for Gene: WBGene00065324

WBGene00065324 SMap: S_parent: Sequence: Crem_Contig31
  Identity: Version: 3
    Name: CGC_name: Cre-pqn-39 From_analysis: Inferred_from_orthology
      Sequence_name: CRE22442
      Molecular_name: CRE22442
        CRE22442.1
        RP03235
      Other_name: cr01.sctg59.wum.79
      Public_name: Cre-pqn-39
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:49 WBPerson2970 Name_change: CGC_name: Cre-pqn-39
        3 03 Jul 2008 11:46:04 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE22442
                Other_name: cr01.sctg59.wum.79
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqn
    RNASeq_FPKM: WBls:0000004 2.37605 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        2.46914 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.56222 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 14.1402 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        15.027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        15.8931 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        16.7592 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        21.801 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        2.97339 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 12.8616 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        17.7351 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        17.7671 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3.08248 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 3.19695 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.49824 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.89276 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        4.35225 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        4.81174 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.86377 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        6.29579 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        7.48712 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 5.87915 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        7.55138 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00160560
      00160561
      00160562
      00160563
    Ortholog (14)
    Structured_description: Automated_description: Predicted to enable RNA binding activity and intramolecular transferase activity. Predicted to be involved in pseudouridine synthesis. Is an ortholog of C. elegans pqn-39. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE22442
    Corresponding_transcript: CRE22442.1
    Other_sequence: DVC02658_1
      EV852087.1
      ES409561.1
      AYC02234_1
      CRC10758_1
      AE00486
  Experimental_info: Expr_pattern: Expr1107978
    Microarray_results: GPL14146_CRE22442_1047-1106_0.748_106_B
      GPL14146_CRE22442_1797-1856_0.828_40_A
      GPL14146_CRE22442_793-852_0.792_68_C
  Method: Gene