WormBase Tree Display for Gene: WBGene00065838

WBGene00065838 SMap: S_parent: Sequence: Crem_Contig57
  Identity: Version: 3
    Name: CGC_name: Cre-lgc-35 From_analysis: Inferred_from_orthology
      Sequence_name: CRE12114
      Molecular_name: CRE12114
        CRE12114.1
        RP34819
      Other_name: cr01.sctg67.wum.11
      Public_name: Cre-lgc-35
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 21 Apr 2008 17:10:50 WBPerson2970 Name_change: CGC_name: Cre-lgc-35
        3 03 Jul 2008 11:46:07 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE12114
                Other_name: cr01.sctg67.wum.11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    RNASeq_FPKM: WBls:0000004 0.114776 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.195442 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.276108 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (51)
      WBls:0000027 0.138654 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        0.165098 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.277307 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        0.383085 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.234184 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.241298 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        0.461253 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 0.304264 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.313327 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.334354 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.483241 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.504354 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.632129 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.654592 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.787456 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 0.167653 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.381673 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.484594 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        0.810263 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBls:0000063.control_median
      WBls:0000101 0.248326 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        0.258703 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00160977
      00160978
      00160979
      00160980
      00160981
      00160982
    Ortholog (20)
    Paralog (122)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-35. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE12114
    Corresponding_transcript: CRE12114.1
    Other_sequence: Tcol_isotig08909
      FC553416.1
      FC544023.1
      ACC14314_1
      Acan_isotig12160
      FC543191.1
      Tcol_isotig08908
      FC550114.1
  Experimental_info: Expr_pattern: Expr1115768
    Microarray_results: GPL14146_CRE12114_1139-1198_0.954_3_A
      GPL14146_CRE12114_980-1039_0.956_1_B
      GPL14146_CRE12114_983-1042_0.954_2_C
  Method: Gene