WormBase Tree Display for Gene: WBGene00066581

WBGene00066581 SMap: S_parent: Sequence: Crem_Contig11
  Identity: Version: 4
    Name: CGC_name: Cre-stam-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE03987
      Molecular_name: CRE03987
        CRE03987.1
        RP38046
      Other_name: Cre-pqn-19
        cr01.sctg78.wum.14
      Public_name: Cre-stam-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:42 WBPerson2970 Name_change: CGC_name: Cre-pqn-19
        3 27 Mar 2008 14:46:15 WBPerson2970 Name_change: CGC_name: Cre-stam-1
        4 03 Jul 2008 11:46:10 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE03987
                Other_name: cr01.sctg78.wum.14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: stam
    RNASeq_FPKM: WBls:0000004 46.1068 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        50.6967 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        55.2865 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 33.2106 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        35.1097 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        37.6447 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        40.1797 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        50.3014 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        7.25175 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 19.025 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        42.4592 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        51.2282 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        57.1244 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 102.651 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        105.066 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        106.253 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        110.995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        117.045 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        98.3941 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        98.6596 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        99.0483 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 53.2574 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        59.657 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00161548
      00161549
    Ortholog (31)
    Paralog: WBGene00051822 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00058354 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00059440 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00062266 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00074089 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable phosphatidylinositol binding activity and ubiquitin binding activity. Is an ortholog of C. elegans stam-1. In C. elegans, stam-1 is involved in several processes, including cellular localization; ephrin receptor signaling pathway; and response to hermaphrodite contact. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE03987
    Corresponding_transcript: CRE03987.1
    Other_sequence (49)
  Experimental_info: Expr_pattern: Expr1111969
    Microarray_results: GPL14146_CRE03987_153-212_0.840_82_B
      GPL14146_CRE03987_384-443_0.870_42_A
      GPL14146_CRE03987_45-104_0.862_53_C
  Method: Gene