WormBase Tree Display for Gene: WBGene00068627

WBGene00068627 SMap: S_parent: Sequence: Crem_Contig123
  Identity: Version: 5
    Name: CGC_name: Cre-spl-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE19389
      Molecular_name: CRE19389
        CRE19389.1
        RP07380
      Other_name: cr01.sctg122.wum.33
        Cre-tag-38
      Public_name: Cre-spl-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-tag-38
        3 03 Jul 2008 11:46:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE19389
                Other_name: cr01.sctg122.wum.33
        4 03 Jul 2018 11:45:27 WBPerson1983 Name_change: CGC_name: Retired non-elegans tag gene names
        5 08 Feb 2019 15:42:26 WBPerson1983 Name_change: CGC_name: Cre-spl-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spl
    RNASeq_FPKM: WBls:0000004 0.427775 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.522246 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.616716 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.725851 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.69503 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        2.327 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        2.45454 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        3.21404 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        3.6731 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 1.57496 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        6.44014 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        8.46161 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        9.28386 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.410551 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.472873 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.480989 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.54996 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.568683 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.618931 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.63788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.790874 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 0.759278 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.7955 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00163075
      00163076
      00163077
    Ortholog (34)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable carbon-carbon lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in carboxylic acid metabolic process. Is an ortholog of C. elegans spl-2. In C. elegans, spl-2 is involved in defense response to Gram-positive bacterium. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE19389
    Corresponding_transcript: CRE19389.1
    Other_sequence: CR11485
  Experimental_info: Expr_pattern: Expr1095482
    Microarray_results: GPL14146_CRE19389_1007-1066_0.907_23_B
      GPL14146_CRE19389_1065-1124_0.896_35_C
      GPL14146_CRE19389_1264-1323_0.952_1_A
  Method: Gene