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WormBase Tree Display for Gene: WBGene00070494

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Name Class

WBGene00070494SMapS_parentSequenceCrem_Contig11
IdentityVersion2
NameSequence_nameCRE03812
Molecular_nameCRE03812
CRE03812.1
RP15843
Other_namecr01.sctg190.wum.7
Public_nameCRE03812
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
203 Jul 2008 11:46:29WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE03812
Other_namecr01.sctg190.wum.7
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000410.3852From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
11.3244From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
12.2635From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:00000240.131337From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
0.154429From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
0.205663From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
0.231433From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
0From_analysis (49)
WBls:00000270.274084From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
0.421758From_analysisRNASeq.remanei.WBls:0000027.control_median
0.569432From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
0.855866From_analysisRNASeq.remanei.WBls:0000027.control_mean
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
2.57995From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.15951From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
0.441918From_analysisRNASeq.remanei.WBls:0000038.control_mean
0.480495From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
0.685748From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.094114From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
0.202698From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
0.276046From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.23472From_analysisRNASeq.remanei.WBls:0000041.control_median
1.34018From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.1934From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.39021From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2.8846From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:00000630.360621From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
0.458277From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
0.613212From_analysisRNASeq.remanei.WBls:0000063.control_median
0.730559From_analysisRNASeq.remanei.WBls:0000063.control_mean
0.768147From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
0.787857From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
0.824087From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
1.30388From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
2.80272From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
WBls:00001010.524963From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.64402From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00164536
00164537
00164538
00164539
OrthologWBGene00144930Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00150341Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158444Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162465Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164781Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00006552Caenorhabditis elegansFrom_analysisWormBase-Compara
Csp11.Scaffold408.g947Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_06346Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001348Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIII_pilon.g9065Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00081658Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE03812
Corresponding_transcriptCRE03812.1
Experimental_infoExpr_patternExpr1097884
Expr1114965
Microarray_resultsGPL14146_CRE03614_486-545_0.962_1_A
GPL14146_CRE03812_899-958_0.909_10_A
GPL14146_CRE03812_994-1053_0.950_2_B
MethodGene