WormBase Tree Display for Gene: WBGene00071070

WBGene00071070 SMap: S_parent: Sequence: Crem_Contig154
  Identity: Version: 3
    Name: CGC_name: Cre-gtf-2A2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE20924
      Molecular_name: CRE20924
        CRE20924.1
        RP04789
      Other_name: cr01.sctg224.wum.11
      Public_name: Cre-gtf-2A2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:31 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE20924
                Other_name: cr01.sctg224.wum.11
        3 08 Feb 2019 15:42:26 WBPerson1983 Name_change: CGC_name: Cre-gtf-2A2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gtf
    RNASeq_FPKM: WBls:0000004 2.2592 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        4.77421 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        7.28922 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 12.4943 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        12.7271 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        3.03939 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        34.2108 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        7.88324 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 19.4916 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        24.3853 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        25.4224 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        28.2419 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 16.4027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        19.7779 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        20.7337 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        26.1016 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        26.254 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        31.4695 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        33.2435 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        35.8964 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 16.2789 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        16.6286 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00164994
      00164995
    Ortholog (28)
    Paralog: WBGene00055616 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be part of transcription factor TFIIA complex. Is an ortholog of C. elegans gtf-2A2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE20924
    Corresponding_transcript: CRE20924.1
    Other_sequence (28)
  Experimental_info: Expr_pattern: Expr1115431
    Microarray_results: GPL14146_CRE20924_224-283_0.959_1_C
      GPL14146_CRE20924_251-310_0.932_6_A
      GPL14146_CRE20924_57-116_0.842_20_B
  Method: Gene