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WormBase Tree Display for Gene: WBGene00071528

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Name Class

WBGene00071528SMapS_parentSequenceCrem_Contig8
IdentityVersion3
NameCGC_nameCre-rpoa-12From_analysisInferred_from_orthology
Sequence_nameCRE30656
Molecular_nameCRE30656
CRE30656.1
RP20883
Other_namecr01.sctg258.wum.12
Public_nameCre-rpoa-12
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
203 Jul 2008 11:46:32WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE30656
Other_namecr01.sctg258.wum.12
328 Sep 2012 14:32:03WBPerson2970Name_changeCGC_nameCre-rpoa-12
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpoa
RNASeq_FPKMWBls:000000412.9747From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
13.909From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
14.8433From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002710.1296From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
10.7185From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
12.3558From_analysisRNASeq.remanei.WBls:0000027.control_median
13.993From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
29.2468From_analysisRNASeq.remanei.WBls:0000027.control_mean
82.1463From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003810.8533From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
21.2234From_analysisRNASeq.remanei.WBls:0000038.control_mean
24.9309From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
27.8859From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004126.5901From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
26.9131From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
31.5244From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
47.7587From_analysisRNASeq.remanei.WBls:0000041.control_median
48.646From_analysisRNASeq.remanei.WBls:0000041.control_mean
63.993From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
66.5277From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
76.328From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010117.8608From_analysisRNASeq.remanei.total_over_all_stages.control_median
30.7861From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00165496
00165497
00165498
00165499
Ortholog (29)
ParalogWBGene00052965Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072638Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-directed 5'-3' RNA polymerase activity; nucleic acid binding activity; and zinc ion binding activity. Predicted to be involved in DNA-templated transcription. Is an ortholog of C. elegans rpoa-12.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE30656
Corresponding_transcriptCRE30656.1
Other_sequence (40)
Experimental_infoExpr_patternExpr1105546
Microarray_resultsGPL14146_CRE30656_169-228_0.944_1_A
MethodGene