WormBase Tree Display for Gene: WBGene00071952

WBGene00071952 SMap: S_parent: Sequence: Crem_Contig20
  Identity: Version: 3
    Name: CGC_name: Cre-cdd-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE12716
      Molecular_name: CRE12716
        CRE12716.1
        RP14477
      Other_name: cr01.sctg294.wum.9
      Public_name: Cre-cdd-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:29 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:47 WBPerson2970 Name_change: CGC_name: Cre-cdd-2
        3 03 Jul 2008 11:46:34 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE12716
                Other_name: cr01.sctg294.wum.9
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdd
    RNASeq_FPKM: WBls:0000004 125.855 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        126.504 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        127.152 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 22.1842 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        29.7656 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        30.8605 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        39.5368 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        47.4244 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        9.91688 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 56.5334 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        79.4821 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        80.7244 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        9.39378 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 114.242 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        121.264 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        127.258 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        127.657 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        128.676 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        130.094 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        132.802 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        140.282 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 59.4906 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        69.1278 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00165830
      00165831
      00165832
      00165833
    Ortholog (28)
    Paralog: WBGene00056997 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00058795 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable cytidine deaminase activity and zinc ion binding activity. Predicted to be involved in cytidine deamination. Is an ortholog of C. elegans cdd-2. In C. elegans, cdd-2 is involved in RNA modification; embryo development; and pyrimidine nucleoside metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE12716
    Corresponding_transcript: CRE12716.1
    Other_sequence (57)
  Experimental_info: Expr_pattern: Expr1112436
    Microarray_results: GPL14146_CRE12716_383-442_0.947_4_A
  Method: Gene