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WormBase Tree Display for Gene: WBGene00072110

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Name Class

WBGene00072110SMapS_parentSequenceCrem_Contig297
IdentityVersion3
NameCGC_nameCre-tat-2From_analysisInferred_from_orthology
Sequence_nameCRE12335
Molecular_nameCRE12335
CRE12335.1
RP34878
Other_namecr01.sctg311.wum.1
Public_nameCre-tat-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
203 Jul 2008 11:46:35WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE12335
Other_namecr01.sctg311.wum.1
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-tat-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtat
RNASeq_FPKMWBls:00000040.059873From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.083765From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.107657From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.109534From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
0.180942From_analysisRNASeq.remanei.WBls:0000027.control_median
0.25235From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
0.296444From_analysisRNASeq.remanei.WBls:0000027.control_mean
0.823892From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.092426From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
0.283849From_analysisRNASeq.remanei.WBls:0000038.control_mean
0.379033From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
0.380088From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.064682From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.072358From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.10614From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
0.107061From_analysisRNASeq.remanei.WBls:0000041.control_median
0.107982From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.108549From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.141336From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
0.158795From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (11)
WBls:00001010.150065From_analysisRNASeq.remanei.total_over_all_stages.control_median
0.249105From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00165938
00165939
00165940
00165941
00165942
00165943
00165944
00165945
Ortholog (36)
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to enable ATP hydrolysis activity; ATPase-coupled intramembrane lipid transporter activity; and ion binding activity. Predicted to be involved in phospholipid transport. Predicted to be located in membrane. Is an ortholog of C. elegans tat-2. In C. elegans, tat-2 is involved in sterol metabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE12335
Corresponding_transcriptCRE12335.1
Other_sequenceAYC04533_1
EL889692.1
JI483315.1
AE04202
EL888209.1
Experimental_infoExpr_patternExpr1103127
Microarray_resultsGPL14146_CRE12335_3978-4037_0.912_4_A
MethodGene