WormBase Tree Display for Gene: WBGene00072399

WBGene00072399 SMap: S_parent: Sequence: Crem_Contig232
  Identity: Version: 3
    Name: CGC_name: Cre-luc-7L3 From_analysis: Inferred_from_orthology
      Sequence_name: CRE22117
      Molecular_name: CRE22117
        CRE22117.1
        RP48952
      Other_name: cr01.sctg359.wum.3
      Public_name: Cre-luc-7L3
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:29 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:36 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE22117
                Other_name: cr01.sctg359.wum.3
        3 04 Jun 2020 14:38:21 WBPerson1983 Name_change: CGC_name: Cre-luc-7L3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: luc
    RNASeq_FPKM: WBls:0000004 0.327183 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        1.35436 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.38153 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.772176 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.77507 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        2.41587 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        2.99463 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        3.05668 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        6.37459 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.130315 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.390945 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 10.5293 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        13.0249 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        17.2672 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        19.0681 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        21.5095 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        28.0123 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        33.0339 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        8.29868 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (11)
      WBls:0000101 2.71911 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        6.92318 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00166208
      00166209
      00166210
    Ortholog (23)
    Paralog: WBGene00057665 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00071290 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable mRNA binding activity. Predicted to be involved in mRNA splice site recognition. Predicted to be part of U1 snRNP. Is an ortholog of C. elegans luc-7L3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE22117
    Corresponding_transcript: CRE22117.1
    Other_sequence: Acan_isotig03088
      Oden_isotig19204
      CJC09624_1
      GP02838
      NB08897
      NBC03800_1
      GP02203
      Acan_isotig03087
      GPC01373_1
  Experimental_info: Expr_pattern: Expr1097952
    Microarray_results: GPL14146_CRE22117_199-258_0.816_7_B
      GPL14146_CRE22117_248-307_0.918_1_A
      GPL14146_CRE22117_37-96_0.893_4_C
  Method: Gene