WormBase Tree Display for Gene: WBGene00074005

WBGene00074005 SMap: S_parent: Sequence: Crem_Contig751
  Identity: Version: 4
    Name: CGC_name: Cre-pin-2.2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE22197
      Molecular_name: CRE22197
        CRE22197.1
        RP05100
      Other_name: cr01.sctg1024.wum.2
        Cre-pin-2 From_analysis: Inferred_from_orthology
      Public_name: Cre-pin-2.2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:29 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:47 WBPerson2970 Name_change: CGC_name: Cre-pin-2
        3 03 Jul 2008 11:46:43 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE22197
                Other_name: cr01.sctg1024.wum.2
        4 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-pin-2.2
                Other_name: Cre-pin-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pin
    RNASeq_FPKM: WBls:0000004 0.079333 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.158666 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (52)
      WBls:0000027 0.381477 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.0949 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        2.19141 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        2.61121 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        3.12752 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        3.16174 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 0.096569 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.41015 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.64572 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4.48815 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 1.80176 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.81107 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.48605 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        2.52842 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.57079 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.57468 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        3.24407 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.53433 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 2.43137 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        2.52842 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog (28)
    Paralog: WBGene00051653 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00055552 Caenorhabditis remanei From_analysis: TreeFam
            GeneACeDB-Compara
      WBGene00062689 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053657 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00060910 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00061398 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00067120 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00068659 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00068714 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00075545 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, LIM-type; LIM domain; and LIM and senescent cell antigen-like-containing domain protein 1-like. Is an ortholog of C. elegans pin-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE22197
    Corresponding_transcript: CRE22197.1
    Other_sequence: EX011602.1
      HBC22718_1
      ES744267.1
      Hbac_isotig03924
  Method: Gene