WormBase Tree Display for Gene: WBGene00074977

WBGene00074977 SMap: S_parent: Sequence: Crem_Contig1654
  Identity: Version: 3
    Name: CGC_name: Cre-rpl-34 From_analysis: Inferred_from_orthology
      Sequence_name: CRE07160
      Molecular_name: CRE07160
        CRE07160.1
        RP00123
      Other_name: cr01.sctg1799.wum.2
      Public_name: Cre-rpl-34
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:29 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:47 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE07160
                Other_name: cr01.sctg1799.wum.2
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cre-rpl-34
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    RNASeq_FPKM: WBls:0000004 235.169 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        294.966 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        354.764 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 3175.18 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        5508.9 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        5653.26 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        5702.02 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        5750.77 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        7456.39 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 2736.85 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3567.58 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4799.27 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        8093.38 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 1187.43 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        1281.08 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1410.39 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        1434.4 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1439.14 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1458.4 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        1639.99 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1657.53 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 1809.97 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        2482.98 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00168085
      00168086
      00168087
    Ortholog (31)
    Paralog: WBGene00066277 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans rpl-34. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE07160
    Corresponding_transcript: CRE07160.1
    Other_sequence (94)
  Experimental_info: Expr_pattern: Expr1102781
    Microarray_results: GPL14146_CRE07160_201-260_0.873_14_C
      GPL14146_CRE07160_273-332_0.939_3_B
      GPL14146_CRE07160_81-140_0.960_1_A
    Expression_cluster: WBPaper00054996:activated_sperm_CRE
      WBPaper00054996:membranous_oraganelle_CRE
  Method: Gene