WormBase Tree Display for Gene: WBGene00077431

WBGene00077431 SMap: S_parent: Sequence: Crem_Contig80
  Identity: Version: 3
    Name: CGC_name: Cre-mls-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE01190
      Molecular_name: CRE01190
        CRE01190.1
        RP11233
      Other_name: cr01.sctg81.wum.9
      Public_name: Cre-mls-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 14:39:32 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:53 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE01190
                Other_name: cr01.sctg81.wum.9
        3 04 Jul 2008 11:06:47 WBPerson4055 Name_change: CGC_name: Cre-mls-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mls
    RNASeq_FPKM: WBls:0000004 0.08829 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.176581 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (45)
      WBls:0000027 0.226096 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.904385 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
            RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 0.369488 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        0.39751 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.823042 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 0.181399 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.222337 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.370995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.371229 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.375003 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.379011 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.507406 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.566229 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 0.226758 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0.570154 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.734362 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        0.964307 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBls:0000063.control_median
        3.77611 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
      WBls:0000101 0.17899 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        0.3924 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00169360
      00169361
      00169362
      00169363
    Ortholog (32)
    Paralog (50)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans mls-1. In C. elegans, mls-1 is involved in muscle cell fate specification and post-embryonic development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE01190
    Corresponding_transcript: CRE01190.1
    Other_sequence: HS00120
      HSC00353_1
      Tcol_isotig23418
      Oden_isotig24121
      CBC10331_1
      HG10183
      JI178677.1
      HGC09113_1
      JI469227.1
      Dviv_isotig26330
  Experimental_info: Expr_pattern: Expr1107142
    Microarray_results: GPL14146_CRE01190_205-264_0.890_16_C
      GPL14146_CRE01190_377-436_0.912_6_A
      GPL14146_CRE01190_522-581_0.912_7_B
  Method: Gene