WormBase Tree Display for Gene: WBGene00079878

WBGene00079878 SMap: S_parent: Sequence: Crem_Contig16
  Identity: Version: 2
    Name: CGC_name: Cre-eat-16 From_analysis: Inferred_from_orthology
      Sequence_name: CRE08034
      Molecular_name: CRE08034
        CRE08034.1
        RP44374
      Public_name: Cre-eat-16
    Species: Caenorhabditis remanei
    History: Version_change: 1 03 Jul 2008 11:46:53 WBPerson4055 Event: Created
        2 04 Jul 2008 11:06:47 WBPerson4055 Name_change: CGC_name: Cre-eat-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: eat
    RNASeq_FPKM: WBls:0000004 13.2386 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        13.6143 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        13.9899 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 27.3228 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        29.1532 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        30.7384 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        32.3236 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        42.7349 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        5.07957 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 20.0939 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        25.8372 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        29.1452 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        5.29933 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 3.32696 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.65995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.94333 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        5.19897 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        5.39886 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        6.45461 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        7.35396 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        7.65432 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 13.583 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        8.17802 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00170115
      00170116
    Ortholog (29)
    Paralog: WBGene00052543 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051158 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00051629 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00051966 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00059606 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00068120 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00072351 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00085237 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in G protein-coupled receptor signaling pathway and intracellular signal transduction. Is an ortholog of C. elegans eat-16. In C. elegans, eat-16 is involved in several processes, including phospholipase C-inhibiting G protein-coupled receptor signaling pathway; regulation of cell communication; and response to monoamine. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE08034
    Corresponding_transcript: CRE08034.1
    Other_sequence (36)
  Experimental_info: Expr_pattern: Expr1105730
    Microarray_results: GPL14146_CRE08034_1136-1195_0.930_5_C
      GPL14146_CRE08034_1253-1312_0.930_4_B
      GPL14146_CRE08034_842-901_0.913_10_A
  Method: Gene