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WormBase Tree Display for Gene: WBGene00082227

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Name Class

WBGene00082227SMapS_parentSequenceCrem_Contig28
IdentityVersion2
NameCGC_nameCre-set-2From_analysisInferred_from_orthology
Sequence_nameCRE20197
Molecular_nameCRE20197
CRE20197.1
RP34868
Public_nameCre-set-2
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:54WBPerson4055EventCreated
204 Jul 2008 11:06:47WBPerson4055Name_changeCGC_nameCre-set-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:000000477.703From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
81.0823From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
84.4615From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002711.2739From_analysisRNASeq.remanei.WBls:0000027.control_mean
11.7203From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
12.9341From_analysisRNASeq.remanei.WBls:0000027.control_median
14.148From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
16.9418From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.28564From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:00000382.66506From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.29803From_analysisRNASeq.remanei.WBls:0000038.control_mean
6.49982From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
6.72921From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004111.5052From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
12.6111From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
12.9169From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
25.2353From_analysisRNASeq.remanei.WBls:0000041.control_median
25.3505From_analysisRNASeq.remanei.WBls:0000041.control_mean
37.5538From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
38.5456From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
38.9702From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010116.6137From_analysisRNASeq.remanei.total_over_all_stages.control_mean
6.75939From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00171050
00171051
Ortholog (30)
Paralog (45)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans set-2. In C. elegans, set-2 is involved in determination of adult lifespan and transdifferentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE20197
Corresponding_transcriptCRE20197.1
Other_sequence (34)
Experimental_infoExpr_patternExpr1096189
Microarray_resultsGPL14146_CRE20197_4127-4186_0.943_3_C
GPL14146_CRE20197_4490-4549_0.956_1_A
GPL14146_CRE20197_4497-4556_0.955_2_B
MethodGene