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WormBase Tree Display for Gene: WBGene00086102

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Name Class

WBGene00086102SMapS_parentSequenceCrem_Contig9
IdentityVersion2
NameCGC_nameCre-ztf-26From_analysisInferred_from_orthology
Sequence_nameCRE29763
Molecular_nameCRE29763
CRE29763.1
RP43590
Public_nameCre-ztf-26
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:54WBPerson4055EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCre-ztf-26
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classztf
RNASeq_FPKMWBls:00000040.180501From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.361001From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000271.60079From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1.7898From_analysisRNASeq.remanei.WBls:0000027.control_mean
1.80335From_analysisRNASeq.remanei.WBls:0000027.control_median
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
2.00592From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
3.55249From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.219182From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
0.976971From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.20142From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
1.51031From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.274427From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.462764From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.568508From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.4466From_analysisRNASeq.remanei.WBls:0000041.control_median
4.67681From_analysisRNASeq.remanei.WBls:0000041.control_mean
8.32469From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
8.66353From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
9.76692From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:00000630.255772From_analysisRNASeq.remanei.WBls:0000063.control_mean
0.694349From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
0.787835From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
1.07554From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
RNASeq.remanei.WBls:0000063.control_median
WBls:00001010.411882From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.5796From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00172475
OrthologWBGene00010137Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00033340Caenorhabditis briggsaeFrom_analysisOMA
WBGene00157084Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g10168Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g12239Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP31.g7677Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1465Caenorhabditis sulstoniFrom_analysisWormBase-Compara
FL83_05090Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002514Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrI_pilon.g1692Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00059990Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00078691Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00078696Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans ztf-26.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29763
Corresponding_transcriptCRE29763.1
Experimental_infoExpr_patternExpr1112184
Microarray_resultsGPL14146_CRE29763_103-162_0.898_13_B
GPL14146_CRE29763_14-73_0.847_38_C
GPL14146_CRE29763_283-342_0.903_8_A
MethodGene