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WormBase Tree Display for Gene: WBGene00086110

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Name Class

WBGene00086110SMapS_parentSequenceCrem_Contig9
IdentityVersion1
NameSequence_nameCRE29541
Molecular_nameCRE29541
CRE29541.1
RP43632
Public_nameCRE29541
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000415.5757From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
16.614From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
17.6524From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.871203From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.13127From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1.15265From_analysisRNASeq.remanei.WBls:0000027.control_median
1.17403From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
1.43503From_analysisRNASeq.remanei.WBls:0000027.control_mean
2.56362From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000382.6946From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.79988From_analysisRNASeq.remanei.WBls:0000038.control_mean
2.84309From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
2.86194From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041101.702From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
103.539From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
20.8794From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
21.0128From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
21.1333From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
58.9595From_analysisRNASeq.remanei.WBls:0000041.control_median
60.842From_analysisRNASeq.remanei.WBls:0000041.control_mean
96.7857From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:000010110.087From_analysisRNASeq.remanei.total_over_all_stages.control_median
19.3925From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (24)
ParalogWBGene00059914Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00079823Caenorhabditis remaneiFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00079974Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Zinc finger, RING/FYVE/PHD-type. Is an ortholog of C. elegans T24D1.3 and har-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29541
Corresponding_transcriptCRE29541.1
Other_sequenceCR10621
CRC12011_1
Experimental_infoExpr_patternExpr1101701
Microarray_resultsGPL14146_CRE29541_1031-1090_0.799_53_B
GPL14146_CRE29541_929-988_0.960_2_A
GPL14146_CRE29541_936-995_0.948_5_C
MethodGene