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WormBase Tree Display for Gene: WBGene00086136

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Name Class

WBGene00086136SMapS_parentSequenceCrem_Contig9
IdentityVersion1
NameSequence_nameCRE29758
Molecular_nameCRE29758
CRE29758.1
RP28469
Public_nameCRE29758
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000413.8316From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
15.5451From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
17.2586From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.6696From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
11.213From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
3.22272From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
8.47165From_analysisRNASeq.remanei.WBls:0000027.control_mean
8.78126From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
9.72543From_analysisRNASeq.remanei.WBls:0000027.control_median
WBls:00000382.1755From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
7.03586From_analysisRNASeq.remanei.WBls:0000038.control_mean
9.40651From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
9.52557From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004115.4615From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
15.5577From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
17.1971From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
20.9169From_analysisRNASeq.remanei.WBls:0000041.control_mean
21.1035From_analysisRNASeq.remanei.WBls:0000041.control_median
25.0099From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
25.987From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
26.2883From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010111.0452From_analysisRNASeq.remanei.total_over_all_stages.control_mean
9.50531From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00172483
00172484
00172485
Ortholog (35)
ParalogWBGene00059173Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00060836Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00061863Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00074142Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00075814Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable flavin adenine dinucleotide binding activity and tRNA dihydrouridine synthase activity. Predicted to be involved in tRNA processing. Is an ortholog of C. elegans F36A2.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29758
Corresponding_transcriptCRE29758.1
Other_sequence (36)
Experimental_infoExpr_patternExpr1096434
Microarray_resultsGPL14146_CRE29758_1433-1492_0.960_2_A
GPL14146_CRE29758_577-636_0.895_17_C
GPL14146_CRE29758_753-812_0.868_35_B
MethodGene