WormBase Tree Display for Gene: WBGene00086160

WBGene00086160 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 2
    Name: CGC_name: Cre-paxt-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29485
      Molecular_name: CRE29485
        CRE29485.1
        RP48170
      Public_name: Cre-paxt-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 03 Jul 2008 11:46:54 WBPerson4055 Event: Created
        2 16 Dec 2013 11:19:18 WBPerson2970 Name_change: CGC_name: Cre-paxt-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: paxt
    RNASeq_FPKM: WBls:0000004 81.5954 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        81.8125 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        82.0296 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 22.4149 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        24.2038 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        25.0683 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        25.9329 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        35.7776 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        3.74511 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 16.2745 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        22.2799 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        22.4353 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        4.10823 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 24.8305 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        26.7065 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        28.1563 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        34.4279 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        36.0396 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        40.6995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        46.2556 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        49.5889 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 22.3576 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        26.1003 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (20)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: XRN2-binding (XTBD) domain and XRN-Two Binding Domain, XTBD. Is an ortholog of C. elegans paxt-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29485
    Corresponding_transcript: CRE29485.1
    Other_sequence: Oden_isotig14867
      CBC08672_1
      Acan_isotig06457
      CR03744
      CRC07806_1
      CBC15920_1
      Oden_isotig14866
      CJC14146_1
      CBC09619_1
      Acan_isotig06458
  Experimental_info: Expr_pattern: Expr1114409
    Microarray_results: GPL14146_CRE29485_430-489_0.909_21_C
      GPL14146_CRE29485_680-739_0.938_7_B
      GPL14146_CRE29485_798-857_0.945_2_A
  Method: Gene