WormBase Tree Display for Gene: WBGene00086867

WBGene00086867 SMap: S_parent: Sequence: cb25.fpc0022b
  Identity: Version: 2
    Name: CGC_name: Cbr-nlp-78 From_analysis: Inferred_from_orthology
      Sequence_name: CBG25453
      Molecular_name: CBG25453
        CBG25453.1
        CBP40384
      Other_name: CBG_25453 Accession_evidence: NDB HE600951
      Public_name: Cbr-nlp-78
    DB_info: Database: NDB locus_tag CBG_25453
    Species: Caenorhabditis briggsae
    History: Version_change: 1 23 Jul 2008 11:20:50 WBPerson1847 Event: Imported: nGASP new gene
        2 22 Dec 2017 13:03:49 WBPerson1983 Name_change: CGC_name: Cbr-nlp-78
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nlp
    RNASeq_FPKM: WBls:0000002 0.975332 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.2777 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.36642 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.84622 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.905508 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.12652 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.25119 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.421195 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.84239 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.280797 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 4.09735 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        5.15185 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        6.20636 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        3.01537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        4.65573 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        4.90276 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        5.05681 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 1.2477 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        2.6552 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        6.7179 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.75045 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        3.0547 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.2532 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 2.28364 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.80523 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        3.14581 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        3.80972 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        4.08384 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        4.47362 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        7.91069 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.954981 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.03547 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.08929 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.14311 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.47103 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.75056 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1.94684 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.15598 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.23248 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        3.81929 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.485748 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.756011 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.927097 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        1.184 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.71952 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        2.03162 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        1.10863 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        1.20169 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.29017 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 1.71952 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.0434 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        1.93892 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.01932 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog: WBGene00061473 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00143941 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00195143 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      CSP26.g16461 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g9050 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Csp11.Scaffold50.g298 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_08436 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_003716 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20302000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5417 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is an ortholog of C. elegans nlp-78. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG25453
    Corresponding_CDS_history: CBG25453:bp255
    Corresponding_transcript: CBG25453.1
  Experimental_info: Expr_pattern: Expr1064698
    Microarray_results: GPL14143_CBG25453_79-138_0.747_1_A
  Method: Gene