WormBase Tree Display for Gene: WBGene00086872

WBGene00086872 SMap: S_parent: Sequence: cb25.fpc0022b
  Identity: Version: 5
    Name: CGC_name: Cbr-gcy-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG25458
      Molecular_name: CBG25458
        CBG25458.1
        CBP47969
      Other_name: CBG_25458 Accession_evidence: NDB HE600951
      Public_name: CBG25458
    DB_info: Database: NDB locus_tag CBG_25458
    Species: Caenorhabditis briggsae
    History: Version_change: 1 23 Jul 2008 11:20:50 WBPerson1847 Event: Imported: nGASP new gene
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbr-gcy-3
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Cbr-gcy-3
        5 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cbr-gcy-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gcy
    Allele: WBVar00140641
      WBVar00064563
    RNASeq_FPKM: WBls:0000002 0.067562 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.275711 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.332169 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.427403 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.038279 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.199865 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.216353 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.030207 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0.035383 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.040559 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.023589 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.065782 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.078296 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.257425 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.628196 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.203393 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.275191 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.32849 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.217822 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.082584 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.083594 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.084603 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.109245 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.269791 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 0.043351 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.068409 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.086178 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.103947 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.132574 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.31459 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.146655 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.157403 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.189363 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.224755 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.040862 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.079075 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.100051 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.106731 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.14773 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.079133 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.079426 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.089739 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 0.084603 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.247814 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.081005 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.211761 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00172645
      00172646
      00172647
      00172648
    Ortholog (27)
    Paralog (39)
    Structured_description: Automated_description: Predicted to enable protein kinase activity. Predicted to be involved in cyclic nucleotide biosynthetic process and intracellular signal transduction. Is an ortholog of C. elegans gcy-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG25458
    Corresponding_CDS_history: CBG25458:bp258
    Corresponding_transcript: CBG25458.1
    Other_sequence: MA00509
      Oden_isotig24761
      Acan_isotig17749
  Remark: [190208 pad] The CGC name Cbr-gcy-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200603 pad] The CGC name Cbr-gcy-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene