WormBase Tree Display for Gene: WBGene00087319

WBGene00087319 SMap: S_parent: Sequence: cb25.fpc2234
  Identity: Version: 4
    Name: CGC_name: Cbr-clec-161 From_analysis: Inferred_from_orthology
      Sequence_name: CBG25905
      Molecular_name: CBG25905
        CBG25905.1
        CBP45431
      Other_name: CBG_25905 Accession_evidence: NDB HE601459
      Public_name: Cbr-clec-161
    DB_info: Database: NDB locus_tag CBG_25905
    Species: Caenorhabditis briggsae
    History: Version_change: 1 23 Jul 2008 11:20:50 WBPerson1847 Event: Imported: nGASP new gene
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbr-clec-161
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Cbr-clec-161
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cbr-clec-161
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    RNASeq_FPKM: WBls:0000002 0.087324 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.109829 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.523 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        4.37185 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.087343 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.098586 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.16409 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.062066 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0.169253 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.27644 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.112835 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.021744 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.032886 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.075835 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.009009 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.018017 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.019843 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.061354 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
            RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.017298 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.01811 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.034595 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.037845 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 0.009893 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.01102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.016053 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.021086 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        20.4774 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        81.8674 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        108.978 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        203.134 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        40.9442 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        65.6702 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 0.223255 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.409967 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.499754 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.545193 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.585141 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.735212 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.054102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.425478 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.47758 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 0.021086 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.08509 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.03374 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        10.5745 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (25)
    Paralog: WBGene00023788 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00023791 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024781 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033079 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037357 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042364 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042502 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Is an ortholog of C. elegans clec-161. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG25905
    Corresponding_CDS_history: CBG25905:bp255
    Corresponding_transcript: CBG25905.1
    Other_sequence: CR00214
      CR12524
      CRC04602_1
      CJC17617_1
  Experimental_info: Expr_pattern: Expr1063337
    Microarray_results: GPL14143_CBG25905_2264-2323_0.942_6_C
      GPL14143_CBG25905_2357-2416_0.941_7_B
      GPL14143_CBG25905_2516-2575_0.944_5_A
  Remark: [190208 pad] The CGC name Cbr-clec-161 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbr-clec-161 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene