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WormBase Tree Display for Gene: WBGene00089411

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Name Class

WBGene00089411SMapS_parentSequencecb25.fpc4403
IdentityVersion1
NameSequence_nameCBG27997
Molecular_nameCBG27997a
CBG27997a.1
CBP29012
CBG27997b
CBP46481
CBG27997c
CBP42749
CBG27997b.1
CBG27997c.1
Other_nameCBG_27997Accession_evidenceNDBHE601156
Public_nameCBG27997
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Jul 2008 11:20:50WBPerson1847EventImportednGASP new gene
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000027.03565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.8908From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.10975From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.52699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.8431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.87887From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.5727From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.405077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.39352From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.38197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.93152From_analysisRNASeq.briggsae.WBls:0000003.control_mean
3.00751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.0719From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.8237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.32009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
8.28337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.56724From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.57901From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.90066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.62289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.5768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.70403From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.96791From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.9943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.47451From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.84916From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000359.72543From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.0608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
11.3937From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.7266From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
12.8508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.05733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.67388From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000412.32947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.34876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.59502From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.84128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.56903From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.75662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.84513From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.16297From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.84899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.85273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.38611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.128From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.59211From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.19214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.46964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.316From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.89212From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001016.70602From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.75662From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.30468From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.76391From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00173007
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans M60.6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG27997a
CBG27997b
CBG27997c
Corresponding_transcriptCBG27997a.1
CBG27997b.1
CBG27997c.1
Other_sequence (31)
Experimental_infoExpr_patternExpr1060414
Microarray_resultsGPL14143_CBG27997_184-243_0.862_2_A
GPL14143_CBG27997_341-400_0.854_5_B
GPL14143_CBG27997_670-729_0.875_1_C
MethodGene