WormBase Tree Display for Gene: WBGene00089674
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| WBGene00089674 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-stau-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA00120 | ||||||||
| Molecular_name | PPA00120 | ||||||||
| PPA00120.1 | |||||||||
| PP65133 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057250 | ||||||||
| UMM-S57-24.45 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-stau-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-stau-1 | ||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-stau-1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-stau-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | stau | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00095300 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00096240 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00107619 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00281610 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Double-stranded RNA binding motif and Double-stranded RNA-binding domain. Is an ortholog of C. elegans stau-1. In C. elegans, stau-1 is involved in germ cell development and negative regulation of post-transcriptional gene silencing by regulatory ncRNA. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA00120 | |||||||
| Corresponding_transcript | PPA00120.1 | ||||||||
| Other_sequence | MIC06186_1 | ||||||||
| Tcol_isotig22348 | |||||||||
| Dviv_isotig15347 | |||||||||
| Dviv_isotig15348 | |||||||||
| Acan_isotig17558 | |||||||||
| JI165268.1 | |||||||||
| JI171103.1 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-stau-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-stau-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
