WormBase Tree Display for Gene: WBGene00089812
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| WBGene00089812 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | Ppa-alr-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA00258 | ||||||||
| Molecular_name | PPA00258 | ||||||||
| PPA00258.1 | |||||||||
| PP64959 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057388 | ||||||||
| UMM-S57-33.50 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-alr-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | alr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00173172 | ||||||||
| Ortholog (29) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity. Is an ortholog of C. elegans alr-1. In C. elegans, alr-1 is involved in several processes, including amphid sensory organ development; epidermis morphogenesis; and sensory perception of touch. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA00258 | |||||||
| Corresponding_transcript | PPA00258.1 | ||||||||
| Other_sequence | AYC03228_1 | ||||||||
| JI170726.1 | |||||||||
| CJC16419_1 | |||||||||
| AE04324 | |||||||||
| Method | Gene |
