WormBase Tree Display for Gene: WBGene00089818
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| WBGene00089818 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | Ppa-fax-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA00264 | ||||||||
| Molecular_name | PPA00264 | ||||||||
| PPA00264.1 | |||||||||
| PP56659 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057394 | ||||||||
| UMS-S57-34.14 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-fax-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fax | ||||||||
| RNASeq_FPKM | WBls:0000032 | 13.8565 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 4.61883 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00173173 | ||||||||
| 00173174 | |||||||||
| 00173175 | |||||||||
| 00173176 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans fax-1. In C. elegans, fax-1 is involved in several processes, including neuron differentiation; positive regulation of transcription by RNA polymerase II; and regulation of locomotion. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA00264 | |||||||
| Corresponding_transcript | PPA00264.1 | ||||||||
| Other_sequence | Acan_isotig10071 | ||||||||
| SR01788 | |||||||||
| CRC12381_1 | |||||||||
| JI170219.1 | |||||||||
| JI475021.1 | |||||||||
| SRC02099_1 | |||||||||
| FC815338.1 | |||||||||
| EY464040.1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_55351 | |||||||
| GPL14372_Probes_55352 | |||||||||
| GPL14372_Probes_55353 | |||||||||
| Method | Gene |
