WormBase Tree Display for Gene: WBGene00089869
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| WBGene00089869 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | CGC_name | Ppa-ctsa-4.2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA00315 | ||||||||
| Molecular_name | PPA00315 | ||||||||
| PPA00315.1 | |||||||||
| PP58568 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057445 | ||||||||
| GENEPREDICTION_SNAP300000057446 | |||||||||
| UMM-S57-37.31 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-ctsa-4.2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00089870 | ||||
| 3 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-ctsa-2 | ||||
| 4 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 08 May 2019 10:09:22 | WBPerson1983 | Name_change | CGC_name | Ppa-ctsa-4.2 | ||||
| 6 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-ctsa-4.2 | ||||
| Acquires_merge | WBGene00089870 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ctsa | ||||||||
| RNASeq_FPKM | WBls:0000032 | 16.2599 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 16.2599 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 16.3934 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 32.9204 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00173195 | ||||||||
| 00173196 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Predicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans ctsa-4.2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA00315 | |||||||
| Corresponding_transcript | PPA00315.1 | ||||||||
| Other_sequence | Oden_isotig20594 | ||||||||
| CJC11951_1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_55432 | |||||||
| GPL14372_Probes_55433 | |||||||||
| GPL14372_Probes_55434 | |||||||||
| GPL14372_Probes_55435 | |||||||||
| GPL14372_Probes_55436 | |||||||||
| GPL14372_Probes_55437 | |||||||||
| GPL14372_Probes_55438 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| WBPaper00041606:PP_B.thuringiensis-DB27_regulated | |||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [190208 pad] The CGC name Ppa-ctsa-2 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00090078 | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-ctsa-4.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
