WormBase Tree Display for Gene: WBGene00089946
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| WBGene00089946 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | CGC_name | Ppa-mnm-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA00392 | ||||||||
| Molecular_name | PPA00392 | ||||||||
| PPA00392.1 | |||||||||
| PP56173 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057522 | ||||||||
| GENEPREDICTION_SNAP300000057523 | |||||||||
| UMM-S57-41.13 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-mnm-2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-mnm-2 | ||||
| 3 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00089947 | ||||
| 4 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 5 | 08 Feb 2019 15:42:26 | WBPerson1983 | Name_change | CGC_name | Ppa-mnm-2 | ||||
| 6 | 27 Nov 2019 12:48:15 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-mnm-2 | ||||
| Acquires_merge | WBGene00089947 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mnm | ||||||||
| RNASeq_FPKM | WBls:0000032 | 1.64999 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.549997 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00173257 | ||||||||
| 00173258 | |||||||||
| 00173259 | |||||||||
| 00173260 | |||||||||
| Ortholog (84) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans mnm-2 and nhr-173. In C. elegans, mnm-2 is involved in positive regulation of axon guidance. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA00392 | |||||||
| Corresponding_transcript | PPA00392.1 | ||||||||
| Other_sequence (12) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_9792 | |||||||
| GPL14372_Probes_9793 | |||||||||
| GPL14372_Probes_9794 | |||||||||
| GPL14372_Probes_55619 | |||||||||
| GPL14372_Probes_55620 | |||||||||
| GPL14372_Probes_55621 | |||||||||
| GPL14372_Probes_55623 | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-mnm-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| [191127 pad] The CGC name Ppa-mnm-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
