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WormBase Tree Display for Gene: WBGene00090218

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Name Class

WBGene00090218SMapS_parentSequencePPA_ChrIII
IdentityVersion2
NameCGC_namePpa-taf-7.2From_analysisInferred_from_orthology
Sequence_namePPA00664
Molecular_namePPA00664
PPA00664.1
PP63367
Other_nameGENEPREDICTION_SNAP300000067389
UMM-S50-35.11Person_evidenceWBPerson606
Public_namePpa-taf-7.2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:03WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-taf-7.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtaf
RNASeq_FPKMWBls:00000325.68195From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010120.1362From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
5.68195From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
8.60605From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00173376
00173377
Ortholog (44)
Structured_descriptionAutomated_descriptionPredicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be part of transcription factor TFIID complex. Is an ortholog of C. elegans taf-7.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA00664
Corresponding_transcriptPPA00664.1
Other_sequence (16)
Experimental_infoMicroarray_resultsGPL14372_Probes_61837
GPL14372_Probes_61838
Expression_clusterWBPaper00041207:PP_dauer_up
MethodGene