WormBase Tree Display for Gene: WBGene00091439
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| WBGene00091439 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | Ppa-mec-4 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA01885 | ||||||||
| Molecular_name | PPA01885 | ||||||||
| PPA01885.1 | |||||||||
| PP57058 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000058323 | ||||||||
| UMM-S259-7.11 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-mec-4 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mec | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 2.0827 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 6.2481 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00173892 | ||||||||
| 00173893 | |||||||||
| 00173894 | |||||||||
| 00173895 | |||||||||
| 00173896 | |||||||||
| Ortholog (32) | |||||||||
| Paralog (46) | |||||||||
| Structured_description | Automated_description | Predicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans mec-4. In C. elegans, mec-4 is involved in regulation of multicellular organismal process; response to mechanical stimulus; and sodium ion transmembrane transport. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA01885 | |||||||
| Corresponding_transcript | PPA01885.1 | ||||||||
| Other_sequence (15) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_62613 | |||||||
| GPL14372_Probes_62614 | |||||||||
| GPL14372_Probes_62615 | |||||||||
| GPL14372_Probes_62616 | |||||||||
| GPL14372_Probes_62617 | |||||||||
| Method | Gene |
