WormBase Tree Display for Gene: WBGene00091489
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| WBGene00091489 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | PPA01935 | |||||||
| Molecular_name | PPA01935 | ||||||||
| PPA01935.1 | |||||||||
| PP73939 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000058373 | ||||||||
| UMM-S259-9.73 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA01935 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-zip-9 | ||||
| 3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.74602 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 5.23806 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00173945 | ||||||||
| 00173946 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans atf-4 and atfs-1. In C. elegans, atf-4 is involved in hydrogen sulfide biosynthetic process and positive regulation of gene expression. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA01935 | |||||||
| Corresponding_transcript | PPA01935.1 | ||||||||
| Other_sequence | PPC03532_1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_62806 | |||||||
| GPL14372_Probes_62807 | |||||||||
| GPL14372_Probes_62809 | |||||||||
| GPL14372_Probes_62811 | |||||||||
| GPL14372_Probes_62812 | |||||||||
| GPL14372_Probes_62813 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-zip-9 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
