WormBase Tree Display for Gene: WBGene00091516
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| WBGene00091516 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-rbbp-5 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA01962 | ||||||||
| Molecular_name | PPA01962 | ||||||||
| PPA01962.1 | |||||||||
| PP53816 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000058398 | ||||||||
| GENEPREDICTION_SNAP300000058399 | |||||||||
| GENEPREDICTION_SNAP300000058400 | |||||||||
| GENEPREDICTION_SNAP300000058402 | |||||||||
| UMM-S41-65.24 | Person_evidence | WBPerson606 | |||||||
| Ppa-dpff-1 | From_analysis | Inferred_from_orthology | |||||||
| Public_name | Ppa-rbbp-5 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 14 Oct 2011 15:27:06 | WBPerson2970 | Name_change | CGC_name | Ppa-dpff-1 | ||||
| 3 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00091517 | ||||
| 4 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00091518 | ||||
| 5 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00091520 | ||||
| 6 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-rbbp-5 | ||||
| Other_name | Ppa-dpff-1 | ||||||||
| Acquires_merge | WBGene00091518 | ||||||||
| WBGene00091520 | |||||||||
| WBGene00091517 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rbbp | ||||||||
| RNASeq_FPKM | WBls:0000032 | 13.6634 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 13.288 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 8.9838 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00173963 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00205427 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to be part of Set1C/COMPASS complex. Is an ortholog of C. elegans rbbp-5. In C. elegans, rbbp-5 is involved in several processes, including heterochromatin organization; multicellular organism reproduction; and transdifferentiation. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA01962 | |||||||
| Corresponding_transcript | PPA01962.1 | ||||||||
| Other_sequence (72) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_25189 | |||||||
| GPL14372_Probes_25190 | |||||||||
| GPL14372_Probes_25194 | |||||||||
| GPL14372_Probes_25195 | |||||||||
| GPL14372_Probes_25196 | |||||||||
| Method | Gene |
