WormBase Tree Display for Gene: WBGene00091553
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WBGene00091553 | SMap | S_parent | Sequence | PPA_ChrII | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 5 | |||||||
Name | CGC_name | Ppa-pho-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA01999 | ||||||||
Molecular_name | PPA01999 | ||||||||
PPA01999.1 | |||||||||
PP17341 | |||||||||
Other_name | GENEPREDICTION_SNAP300000058435 | ||||||||
UMM-S41-67.92 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-pho-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 17 Nov 2017 15:19:43 | WBPerson4055 | Name_change | CGC_name | Ppa-pho-13 | ||||
3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00205230 | ||||
4 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
5 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-pho-1 | ||||
Acquires_merge | WBGene00205230 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pho | ||||||||
RNASeq_FPKM | WBls:0000032 | 7.2016 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 17.0109 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
7.2016 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
8.07083 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
Ortholog (35) | |||||||||
Paralog (35) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Histidine phosphatase superfamily; Histidine phosphatase superfamily, clade-2; and Histidine phosphatase superfamily (branch 2). Is an ortholog of C. elegans pho-1. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA01999 | |||||||
Corresponding_transcript | PPA01999.1 | ||||||||
Other_sequence | ACC02538_1 | ||||||||
Experimental_info | Microarray_results | GPL14372_Probes_79195 | |||||||
GPL14372_Probes_79196 | |||||||||
GPL14372_Probes_79197 | |||||||||
GPL14372_Probes_79198 | |||||||||
GPL14372_Probes_79199 | |||||||||
Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
WBPaper00041606:PP_X.nematophila_regulated | |||||||||
Remark | [180319 gw3] The CGC name Ppa-pho-13 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
Method | Gene |