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WormBase Tree Display for Gene: WBGene00091694

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Name Class

WBGene00091694SMapS_parentSequencePPA_ChrIV
IdentityVersion6
NameCGC_namePpa-egl-19From_analysisInferred_from_orthology
Sequence_namePPA02140
Molecular_namePPA02140
PPA02140.1
PP52127
Other_nameGENEPREDICTION_SNAP300000058577
GENEPREDICTION_SNAP300000058604
UMS-S2838-2.57Person_evidenceWBPerson606
Public_namePpa-egl-19
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:03WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:48WBPerson4055EventAcquires_mergeWBGene00091721
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_namePpa-egl-19
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-egl-19
Acquires_mergeWBGene00091721
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classegl
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00174035
00174036
00174037
00174038
00174039
00174040
00174041
OrthologWBGene00079084Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00216262Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00163993Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00028228Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223086Brugia malayiFrom_analysisWormBase-Compara
WBGene00001187Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119574Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218636Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241830Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g11260Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14641Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14855Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10788Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7498Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5334Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16346Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10312Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10914Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25194Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g860Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19423Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6184Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6185Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6186Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-egl-19Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21172Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00060.g2928Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18763Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03310Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7338Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40297810Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00068721Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074138Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g10827Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267812Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294334Trichuris murisFrom_analysisWormBase-Compara
WBGene00296871Trichuris murisFrom_analysisWormBase-Compara
WBGene00301820Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00092845Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107390Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116989Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118298Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of C. elegans egl-19. In C. elegans, egl-19 is involved in several processes, including determination of left/right asymmetry in nervous system; positive regulation of striated muscle contraction; and regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA02140
Corresponding_transcriptPPA02140.1
Other_sequenceJI482628.1
TSC07525_1
Dviv_isotig26740
Dviv_isotig22100
DN556605.1
TMC00929_1
GT570968.1
JI164149.1
Dviv_isotig28173
TM01314
ES567732.1
MA01600
FK801604.1
MAC00903_1
JI461480.1
FG581902.1
MJ03328
Oden_isotig20849
Dviv_isotig22099
Tcol_isotig25567
FG584593.1
MJC03409_1
MIC03875_1
FG584537.1
FG583506.1
Hbac_isotig04439
GE638965.1
FG586648.1
BM00518
JI166832.1
FG583115.1
LSC00039_1
JI462814.1
MI04909
JI468580.1
GT571540.1
FG582320.1
FK801242.1
Experimental_infoMicroarray_resultsGPL14372_Probes_31021
GPL14372_Probes_31022
GPL14372_Probes_31023
GPL14372_Probes_31024
GPL14372_Probes_31025
GPL14372_Probes_31026
GPL14372_Probes_31027
GPL14372_Probes_31028
GPL14372_Probes_31029
Remark[190208 pad] The CGC name Ppa-egl-19 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-egl-19 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene