WormBase Tree Display for Gene: WBGene00091716

WBGene00091716 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 7
    Name: CGC_name: Ppa-hecd-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA02162
      Molecular_name: PPA02162
        PPA02162.1
        PP73154
      Other_name: GENEPREDICTION_SNAP300000058599
        GENEPREDICTION_SNAP300000058602
        UMA-S2838-3.37 Person_evidence: WBPerson606
      Public_name: Ppa-hecd-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 17 Nov 2017 15:19:42 WBPerson4055 Name_change: CGC_name: Ppa-hecd-1
        3 24 Nov 2017 09:46:48 WBPerson4055 Event: Acquires_merge: WBGene00091719
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Ppa-hecd-1
        6 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-hecd-1
      Acquires_merge: WBGene00091719
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hecd
    RNASeq_FPKM: WBls:0000032 0.416877 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.416877 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        0.959439 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        2.46144 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00174053
      00174054
      00174055
    Ortholog (44)
    Paralog: WBGene00093680 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099275 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112263 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116898 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00204228 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277970 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279783 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304671 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00306023 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metal ion binding activity and ubiquitin-protein transferase activity. Predicted to be involved in protein ubiquitination. Is an ortholog of C. elegans hecd-1. In C. elegans, hecd-1 is involved in several processes, including determination of adult lifespan; hemidesmosome assembly; and regulation of Notch signaling pathway. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA02162
    Corresponding_transcript: PPA02162.1
    Other_sequence (91)
  Experimental_info: Microarray_results (12)
  Remark: [190208 pad] The CGC name Ppa-hecd-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-hecd-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene