WormBase Tree Display for Gene: WBGene00091908
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| WBGene00091908 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | Ppa-arx-5 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA02354 | ||||||||
| Molecular_name | PPA02354 | ||||||||
| PPA02354.1 | |||||||||
| PP59271 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000060015 | ||||||||
| UMM-S50-13.49 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-arx-5 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 3 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-arx-5 | ||||
| 4 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-arx-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | arx | ||||||||
| RNASeq_FPKM | WBls:0000032 | 32.3801 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 29.0039 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 32.3801 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 54.6316 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00174213 | ||||||||
| 00174214 | |||||||||
| 00174215 | |||||||||
| 00174216 | |||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in Arp2/3 complex-mediated actin nucleation and regulation of actin filament polymerization. Predicted to be located in cytoskeleton. Predicted to be part of Arp2/3 protein complex. Is an ortholog of C. elegans arx-5. In C. elegans, arx-5 is involved in epithelial cell migration and morphogenesis of embryonic epithelium. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA02354 | |||||||
| Corresponding_transcript | PPA02354.1 | ||||||||
| Other_sequence (47) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_41173 | |||||||
| GPL14372_Probes_41174 | |||||||||
| GPL14372_Probes_41175 | |||||||||
| GPL14372_Probes_41178 | |||||||||
| GPL14372_Probes_41180 | |||||||||
| GPL14372_Probes_41181 | |||||||||
| GPL14372_Probes_41182 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Remark | [190208 pad] The CGC name Ppa-arx-5 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-arx-5 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
