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WormBase Tree Display for Gene: WBGene00092466

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Name Class

WBGene00092466SMapS_parentSequencePPA_ChrIII
IdentityVersion1
NameCGC_namePpa-rom-1From_analysisInferred_from_orthology
Sequence_namePPA02912
Molecular_namePPA02912
PPA02912.1
PP57501
Other_nameGENEPREDICTION_SNAP300000059255
UMM-S2864-32.47Person_evidenceWBPerson606
Public_namePpa-rom-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:03WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrom
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010118.8679From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
6.2893From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00174518
00174519
00174520
Ortholog (35)
ParalogWBGene00094931Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103624Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106545Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to be located in membrane. Is an ortholog of C. elegans rom-1. In C. elegans, rom-1 is involved in positive regulation of vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA02912
Corresponding_transcriptPPA02912.1
Other_sequence (13)
Experimental_infoMicroarray_resultsGPL14372_Probes_7877
GPL14372_Probes_7879
GPL14372_Probes_7881
GPL14372_Probes_7882
GPL14372_Probes_7883
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041606:PP_X.nematophila_regulated
MethodGene