WormBase Tree Display for Gene: WBGene00093542

WBGene00093542 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 3
    Name: CGC_name: Ppa-hda-11 From_analysis: Inferred_from_orthology
      Sequence_name: PPA03988
      Molecular_name: PPA03988
        PPA03988.1
        PP40489
      Other_name: GENEPREDICTION_SNAP300000060408
        Ppa-hdac-11 From_analysis: Inferred_from_orthology
        UMM-S2844-50.42 Person_evidence: WBPerson606
      Public_name: Ppa-hda-11
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 02 Nov 2009 10:33:57 WBPerson2970 Name_change: CGC_name: Ppa-hdac-11
        3 12 Apr 2012 16:41:36 WBPerson2970 Name_change: CGC_name: Ppa-hda-11
                Other_name: Ppa-hdac-11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hda
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (26)
    Paralog: WBGene00089603 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097159 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107183 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273785 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273960 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305145 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00306054 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Histone deacetylase family; Histone deacetylase domain; Histone deacetylase domain superfamily; and Ureohydrolase domain superfamily. Is an ortholog of C. elegans hda-11. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA03988
    Corresponding_transcript: PPA03988.1
    Other_sequence: DVC01530_1
      Tcol_isotig02158
      AE03025
      Tcol_isotig02159
      JI172012.1
      EV851677.1
      Acan_isotig04265
      Tcir_isotig14028
  Experimental_info: Microarray_results: GPL14372_Probes_33618
      GPL14372_Probes_33619
      GPL14372_Probes_33620
      GPL14372_Probes_33621
      GPL14372_Probes_33622
  Method: Gene