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WormBase Tree Display for Gene: WBGene00093701

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Name Class

WBGene00093701SMapS_parentSequencePPA_ChrIV
IdentityVersion3
NameSequence_namePPA04147
Molecular_namePPA04147
PPA04147.1
PP72209
Other_nameGENEPREDICTION_SNAP300000060568
GENEPREDICTION_SNAP300000060570
GENEPREDICTION_SNAP300000060571
UMM-S283-9.2Person_evidenceWBPerson606
Public_namePPA04147
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:48WBPerson4055EventAcquires_mergeWBGene00093703
324 Nov 2017 09:46:48WBPerson4055EventAcquires_mergeWBGene00093704
Acquires_mergeWBGene00093703
WBGene00093704
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000326.09461From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.0075From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
5.7007From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
6.09461From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
GO_annotation00175156
00175157
00175158
00175159
00175160
Ortholog (34)
Paralog (30)
Structured_descriptionAutomated_descriptionPredicted to enable several functions, including acireductone dioxygenase [iron(II)-requiring] activity; heme binding activity; and iron ion binding activity. Is an ortholog of C. elegans cyp-29A2; cyp-29A3; and cyp-37B1. In C. elegans, cyp-37B1 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA04147
Corresponding_transcriptPPA04147.1
Other_sequence (23)
Experimental_infoMicroarray_resultsGPL14372_Probes_37976
GPL14372_Probes_37977
GPL14372_Probes_37979
GPL14372_Probes_37980
GPL14372_Probes_37982
GPL14372_Probes_37984
GPL14372_Probes_37985
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041606:PP_X.nematophila_regulated
MethodGene